Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2639
Parameters: 2 7 7 80 10 50 1000
Length:  32870

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5839--5901
20
3.2
20
93
0
108
34
12
19
33
1.89
6259--6315
9
5.9
9
73
15
51
35
8
21
35
1.84
5498--6333
418
2.0
416
95
1
1523
32
14
20
32
1.92
6257--6319
20
3.2
20
95
0
117
36
12
19
31
1.89
6372--6504
22
6.0
23
83
15
165
27
21
23
27
1.99
6372--6503
47
3.0
42
82
16
162
28
21
23
27
1.99
6372--6504
24
6.0
23
83
12
115
27
21
23
27
1.99
6697--6760
31
2.1
31
90
0
101
39
15
23
21
1.92
14252--14299
25
1.9
25
82
0
60
33
22
16
27
1.96
14336--14398
20
3.2
20
90
0
108
34
12
20
31
1.90
14452--14595
24
6.0
24
85
8
195
28
21
20
29
1.98
14789--14852
31
2.1
31
90
0
101
39
15
23
21
1.92
20390--20485
40
2.4
42
84
8
128
26
28
16
29
1.97
24993--25336
40
8.7
40
90
3
486
26
26
21
25
2.00
24970--25336
78
4.7
80
87
5
491
26
26
21
25
2.00

Tables:   1

The End!