Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1920
Parameters: 2 7 7 80 10 50 1000
Length:  35524

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
938--963
3
8.7
3
100
0
52
65
0
0
34
0.93
2425--2619
83
2.3
83
91
1
309
30
22
18
28
1.97
2499--2793
127
2.3
128
94
3
531
29
21
19
29
1.98
2347--2956
44
14.4
41
66
17
233
29
21
18
30
1.97
2840--2956
43
2.7
45
79
9
118
30
20
17
31
1.95
2653--2957
165
1.8
165
94
1
540
30
20
18
30
1.97
2657--2997
165
2.1
166
87
2
479
29
21
19
30
1.97
6695--7310
44
14.4
43
67
12
238
30
18
21
29
1.97
6692--7002
167
1.9
167
95
0
559
30
19
20
29
1.97
7035--7231
85
2.3
85
93
0
331
28
18
22
30
1.97
6859--7156
129
2.3
129
97
0
560
30
19
21
28
1.97
7201--7288
46
1.9
46
83
0
113
29
17
22
30
1.96
8715--8743
3
9.7
3
100
0
58
34
0
0
65
0.93
8963--9016
22
2.4
23
84
3
65
33
1
5
59
1.31
23744--23775
3
10.7
3
100
0
64
34
0
0
65
0.93
23991--24047
24
2.4
23
85
2
69
29
3
5
61
1.35

Tables:   1

The End!