Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2232
Parameters: 2 7 7 80 10 50 1000
Length:  32443

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5518--5578
30
2.0
30
84
6
79
37
6
24
31
1.81
5986--6034
25
2.0
25
95
0
89
12
24
32
30
1.92
5920--6167
102
2.5
102
90
7
384
19
21
29
30
1.97
11910--11934
13
1.9
13
100
0
50
48
0
20
32
1.50
12305--12636
50
6.6
50
85
1
441
26
21
30
21
1.98
12305--12685
50
7.7
47
81
6
183
27
20
29
22
1.99
14348--14415
30
2.2
31
84
2
84
48
7
17
26
1.73
21558--21813
130
2.0
130
88
3
381
35
26
10
27
1.89
23915--23957
21
2.1
20
83
12
52
37
0
2
60
1.10
25073--25115
18
2.3
19
84
15
63
32
2
6
58
1.38
27034--27217
79
2.3
81
84
6
234
25
27
22
25
2.00
27015--27217
39
5.1
40
80
9
220
24
27
22
25
2.00

Tables:   1

The End!