Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2689
Parameters: 2 7 7 80 10 50 1000
Length:  31060

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--404
20
2.1
19
85
4
53
30
0
15
55
1.41
602--949
179
1.9
184
84
10
477
20
18
27
33
1.96
8465--8516
27
1.9
27
96
0
95
13
25
32
28
1.93
8389--8610
103
2.2
103
93
1
374
18
19
31
31
1.95
8530--8681
71
2.1
71
91
2
243
23
17
28
30
1.97
8452--8899
175
2.6
175
97
1
828
21
18
29
30
1.97
8704--8855
71
2.1
72
92
1
252
23
17
29
30
1.97
12951--13077
49
2.6
49
92
2
211
41
10
0
47
1.43
15996--16201
40
5.2
40
94
1
353
27
27
22
22
1.99
17199--17244
24
1.9
24
82
8
58
43
23
6
26
1.78
24114--24314
77
2.6
78
89
7
311
28
26
21
22
1.99
24114--24314
40
5.2
40
90
6
308
28
26
21
22
1.99
25721--25748
13
2.2
13
100
0
56
57
14
0
28
1.38
29687--29859
46
3.7
46
74
10
172
22
19
27
31
1.98
29684--29854
93
1.8
93
89
0
270
22
19
28
30
1.98

Tables:   1

The End!