Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3291
Parameters: 2 7 7 80 10 50 1000
Length:  36967

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1204--1272
22
3.0
23
85
10
88
21
2
14
60
1.47
3425--3521
30
3.2
30
76
2
106
27
16
27
27
1.97
5621--5703
30
2.7
30
81
9
89
13
21
1
63
1.35
5654--5709
18
3.1
18
76
5
51
7
19
3
69
1.27
5679--5703
12
2.1
12
100
0
50
8
16
0
76
1.02
5772--5828
5
11.0
5
75
20
55
1
17
3
77
1.00
5772--5828
16
3.7
14
82
15
60
1
17
3
77
1.00
5772--5839
21
3.2
21
76
15
61
1
17
4
76
1.03
6767--6814
13
3.6
13
85
2
69
16
6
6
70
1.28
8886--8932
20
2.3
20
85
0
67
21
12
36
29
1.91
10023--10119
30
3.2
30
76
2
106
27
16
27
27
1.97
11009--11042
16
2.1
16
88
0
50
35
17
14
32
1.91
13060--13085
11
2.4
11
100
0
52
92
0
0
7
0.39
14082--14116
17
2.1
16
89
5
52
74
5
14
5
1.19
14315--14411
30
3.2
29
75
8
88
29
25
15
28
1.96
18374--18418
22
2.0
23
91
4
74
73
4
11
11
1.23
18376--18417
11
3.7
11
81
15
50
78
4
7
9
1.08
19477--19569
6
15.3
6
70
5
62
72
3
18
6
1.20
19464--19539
18
4.1
18
81
5
89
71
3
17
7
1.26
19572--19634
33
1.9
33
84
12
85
55
6
25
12
1.60
24169--24257
6
14.8
6
68
9
56
73
1
19
6
1.12
24186--24240
17
3.2
16
78
14
65
78
1
14
5
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24273--24335
33
1.9
33
84
12
85
55
6
25
12
1.60
27736--27768
12
3.0
11
91
8
50
72
9
3
15
1.21
28878--28907
11
2.7
11
94
0
51
83
3
13
0
0.77
28878--28969
6
15.3
6
70
7
62
72
2
18
6
1.16
28865--28939
18
4.1
18
81
8
89
72
2
17
8
1.21
28972--29034
33
1.9
33
84
12
85
55
6
25
12
1.60
32436--32501
11
5.5
12
74
20
50
72
4
7
15
1.23
33566--33639
17
4.4
17
80
8
71
72
2
17
6
1.18
33579--33655
11
6.7
11
76
5
73
74
2
18
5
1.13
33579--33656
6
13.5
6
72
6
63
74
2
17
5
1.12
33672--33734
33
1.9
33
84
12
85
55
6
25
12
1.60

Tables:   1

The End!