Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold420
Parameters: 2 7 7 80 10 50 1000
Length:  33604

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10644--10668
1
25.0
1
100
0
50
100
0
0
0
0.00
12101--12337
41
5.6
41
71
15
122
29
20
21
28
1.98
12036--12396
173
2.1
168
88
6
521
31
19
23
26
1.98
12137--12390
45
5.8
45
73
12
197
28
20
24
26
1.99
12187--12425
130
1.9
128
80
8
279
28
20
23
27
1.99
12422--12465
21
2.1
21
87
8
63
36
25
34
4
1.76
14126--14178
3
17.7
3
80
7
63
30
5
1
62
1.29
14305--14384
36
2.2
36
80
8
92
36
8
2
52
1.46
15830--15872
22
2.0
22
90
4
70
30
9
2
58
1.42
21975--22028
23
2.5
22
87
6
74
59
7
1
31
1.36
21978--22047
3
23.3
3
74
11
63
61
5
1
31
1.28
23015--23039
8
3.1
8
100
0
50
24
12
52
12
1.72
23418--23775
46
7.7
46
75
10
248
27
20
19
32
1.97
23316--23871
234
2.5
221
88
6
812
27
21
18
32
1.96
23559--24441
44
19.8
43
71
11
281
27
22
18
31
1.97
23772--23969
98
2.0
98
92
3
328
27
21
17
33
1.96
23870--24391
219
2.4
218
97
0
983
27
23
18
30
1.98
23506--24188
317
2.1
317
93
2
1174
27
22
18
31
1.97

Tables:   1

The End!