Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2510
Parameters: 2 7 7 80 10 50 1000
Length:  32078

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6678--6863
40
4.7
40
94
2
333
24
23
26
25
2.00
6678--6863
79
2.4
78
97
2
347
24
23
26
25
2.00
6685--6886
40
5.2
39
92
3
302
25
22
26
25
2.00
10425--10523
45
2.2
45
94
0
180
22
20
27
30
1.98
13679--13828
27
5.6
27
80
6
160
41
19
8
31
1.80
13669--13820
54
2.8
53
80
4
180
39
19
7
32
1.81
13838--14021
27
6.8
27
85
2
244
28
21
8
41
1.83
13799--14021
81
2.8
81
82
5
202
29
21
9
39
1.85
13838--14021
54
3.4
54
93
0
296
28
21
8
41
1.83
13880--14047
81
2.1
81
82
2
203
30
22
8
38
1.84
14029--14211
27
6.8
27
73
10
101
38
20
12
28
1.89
14015--14127
54
2.1
54
83
6
140
44
21
7
27
1.78
14112--14336
54
4.2
54
90
2
276
34
20
20
24
1.96
14107--14336
81
2.8
80
82
8
270
34
20
20
24
1.96
14139--14360
27
8.3
27
88
0
320
34
19
22
23
1.97
14762--14832
31
2.3
31
95
0
124
21
16
14
47
1.81
14796--14857
25
2.5
25
89
0
88
19
19
14
46
1.83
14762--14874
6
18.3
6
66
18
54
20
17
14
47
1.82
17144--17253
45
2.5
45
89
5
163
22
20
27
29
1.99
18133--18461
50
6.9
50
75
14
254
23
31
18
26
1.98
18184--18454
46
5.8
45
76
11
199
22
30
19
27
1.98
18143--18459
94
3.3
94
75
12
310
23
31
18
26
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22307--22385
37
2.1
37
88
4
115
25
30
18
25
1.98
22504--23041
47
11.5
47
95
0
907
28
29
8
32
1.87
26980--27058
29
2.7
29
86
5
106
27
32
15
24
1.95
27040--27142
43
2.4
43
100
0
206
26
35
15
22
1.94
29005--29083
37
2.1
37
88
4
115
25
30
18
25
1.98
29202--29733
47
11.4
47
94
1
894
29
29
8
32
1.87

Tables:   1

The End!