Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3273
Parameters: 2 7 7 80 10 50 1000
Length:  33118

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2370--2402
11
3.1
11
82
8
50
18
3
9
69
1.28
3807--3846
9
4.3
10
90
9
59
50
10
0
40
1.36
3807--3846
19
2.2
18
86
13
55
50
10
0
40
1.36
5777--7334
580
2.7
552
77
11
1473
40
13
8
37
1.75
8488--8634
42
3.5
42
72
15
142
61
8
2
27
1.37
8467--8634
84
2.0
84
97
1
320
58
9
2
29
1.45
10083--10112
13
2.2
14
94
5
53
33
0
0
66
0.92
10450--10479
15
2.0
15
93
0
51
50
0
0
50
1.00
10528--10566
10
3.7
10
83
12
51
30
2
0
66
1.05
10598--10646
23
2.1
23
96
0
89
38
2
22
36
1.66
13375--13429
21
2.8
19
84
13
67
65
3
0
30
1.10
13371--13482
49
2.2
51
84
10
140
61
1
2
33
1.20
13449--13509
20
3.1
19
72
11
52
63
1
0
34
1.04
13460--13509
20
2.5
20
83
0
64
64
2
0
34
1.05
13561--13664
51
2.0
51
87
3
147
13
56
1
27
1.48
18660--18692
11
3.1
11
82
8
50
18
3
9
69
1.28
20097--20136
9
4.3
10
90
9
59
50
10
0
40
1.36
20097--20136
19
2.2
18
86
13
55
50
10
0
40
1.36
22067--23624
580
2.7
552
77
11
1473
40
13
8
37
1.75
24779--24925
42
3.5
42
72
15
142
61
8
2
27
1.37
24758--24925
84
2.0
84
97
1
320
58
9
2
29
1.45
26374--26403
13
2.2
14
94
5
53
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26742--26771
15
2.0
15
93
0
51
50
0
0
50
1.00
26820--26858
10
3.7
10
83
12
51
30
2
0
66
1.05
26890--26938
23
2.1
23
96
0
89
38
2
22
36
1.66
29667--29725
22
2.8
21
80
12
68
64
3
0
32
1.10
29681--29724
22
2.0
22
90
4
70
63
2
0
34
1.07
29663--29776
51
2.2
53
83
10
137
61
1
2
34
1.20
29663--29776
53
2.2
51
81
13
126
61
1
2
34
1.20
29743--29803
20
3.1
19
72
11
52
63
1
0
34
1.04
29754--29803
20
2.5
20
83
0
64
64
2
0
34
1.05
29855--29957
50
2.0
51
87
5
147
13
56
1
28
1.48

Tables:   1

The End!