Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3470
Parameters: 2 7 7 80 10 50 1000
Length:  8252

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--296
39
7.5
39
91
6
464
25
28
21
23
1.99
1540--1682
38
3.9
37
90
4
218
25
31
17
25
1.97
1537--1682
36
4.0
37
91
5
217
26
31
17
24
1.97
1827--1963
50
2.8
49
87
6
215
30
26
7
35
1.84
1827--2060
50
4.9
50
79
12
208
28
27
9
34
1.89
1827--2062
48
5.0
48
79
12
193
28
27
10
34
1.89
1826--2094
98
2.8
93
83
8
278
27
28
10
34
1.89
1933--2123
47
4.1
47
89
2
271
27
29
10
32
1.90
1933--2123
93
2.1
92
87
3
267
27
29
10
32
1.90
4772--4908
74
1.9
73
84
4
186
18
13
29
37
1.90
5527--5571
23
2.1
20
84
12
54
24
4
13
57
1.54

Tables:   1

The End!