Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1949
Parameters: 2 7 7 80 10 50 1000
Length:  35052

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1561--1737
27
6.6
27
84
2
203
27
15
28
29
1.96
1561--1737
54
3.3
55
84
4
225
27
15
28
29
1.96
1562--1716
81
1.9
81
88
2
231
27
15
28
29
1.96
1558--1737
81
2.2
81
83
2
227
27
15
27
29
1.96
9597--9746
27
5.6
27
81
6
169
28
13
28
29
1.94
19216--19275
30
2.0
30
90
0
93
28
25
8
38
1.84
26173--26237
28
2.3
28
94
0
112
33
27
7
30
1.85
26344--26433
28
3.2
27
85
7
119
20
24
23
32
1.98
26344--26458
55
2.1
56
83
8
146
19
24
21
34
1.96
26908--26932
13
1.9
13
100
0
50
20
0
0
80
0.72
27921--28010
28
3.2
27
84
9
119
32
23
24
20
1.98
28116--28176
28
2.2
28
93
0
104
31
8
27
32
1.86

Tables:   1

The End!