Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1373
Parameters: 2 7 7 80 10 50 1000
Length:  38229

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2451
614
4.0
615
95
1
4419
34
24
12
28
1.92
4656--5114
47
9.7
47
95
0
783
32
8
30
29
1.86
4656--5112
239
1.9
235
94
1
797
32
8
29
29
1.87
5233--5311
37
2.1
37
88
0
113
24
17
31
26
1.97
6069--18185
612
19.6
617
89
6
17971
34
24
12
28
1.92
13657--13848
92
2.0
98
91
6
317
29
30
7
32
1.86
17403--17442
19
2.1
19
100
0
80
25
37
0
37
1.56
17238--19127
940
2.0
936
94
5
3294
33
25
12
29
1.92
18184--20252
610
3.4
615
96
2
3850
33
24
12
28
1.92
19996--20512
257
2.0
259
93
4
904
31
23
14
30
1.94
19384--21125
874
2.0
867
95
2
3149
33
24
12
29
1.92
20252--32166
616
19.2
615
88
5
17003
34
24
12
28
1.92
21771--32166
616
16.9
616
95
0
18582
34
24
12
28
1.92
31396--32933
767
2.0
767
94
0
2684
33
23
13
29
1.93
32163--34133
617
3.2
614
94
1
3374
34
23
12
29
1.92

Tables:   1

The End!