Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3253
Parameters: 2 7 7 80 10 50 1000
Length:  35341

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2108--2219
27
4.2
26
85
7
143
37
23
23
16
1.93
2108--2219
54
2.1
54
88
3
163
37
23
23
16
1.93
3636--3704
24
2.9
24
95
0
120
26
37
1
34
1.65
9940--10050
27
4.2
26
85
10
143
36
23
24
15
1.93
9940--10050
54
2.1
53
88
5
161
36
23
24
15
1.93
11466--11536
24
3.0
24
95
0
124
25
38
1
35
1.65
15367--15551
40
4.6
41
75
12
127
23
20
28
28
1.99
15448--15598
40
3.8
40
80
7
137
24
21
28
25
1.99
15529--15611
39
2.1
39
82
6
96
26
22
28
21
1.99
23254--23437
40
4.6
40
82
6
196
23
20
27
28
1.99
23254--23434
80
2.3
81
83
9
221
23
20
27
27
1.99
23335--23484
40
3.8
38
80
10
131
25
22
28
24
1.99
23375--23497
40
3.1
39
80
6
97
26
21
28
23
1.99
25706--25929
40
5.6
39
85
6
265
24
21
27
25
1.99
25706--25929
78
2.8
80
83
8
287
24
21
27
25
1.99
33697--33920
40
5.7
40
86
6
296
24
22
27
25
2.00
33697--33920
78
2.8
80
84
8
296
24
22
27
25
2.00

Tables:   1

The End!