Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3395
Parameters: 2 7 7 80 10 50 1000
Length:  37668

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4389--4555
90
1.8
91
93
3
293
28
28
20
21
1.98
4388--4552
45
3.7
44
80
8
199
29
28
20
21
1.98
11901--12071
93
1.8
93
93
0
297
29
28
19
22
1.98
11893--12068
46
3.8
46
78
12
207
30
28
18
22
1.97
12502--12580
30
2.6
30
100
0
158
26
27
6
39
1.80
12508--12559
14
3.6
14
70
10
50
23
28
7
40
1.82
12522--12575
16
3.5
16
70
10
58
25
24
7
42
1.80
13706--13872
27
6.2
26
79
9
122
43
19
14
21
1.87
13769--13874
54
2.0
53
85
5
142
40
19
16
22
1.91
13795--13874
27
3.0
27
92
0
133
38
18
17
25
1.92
17110--17225
27
4.3
27
82
4
112
38
19
19
21
1.93
22559--22739
39
4.6
39
85
0
245
26
24
17
31
1.97
22560--22739
78
2.3
78
89
0
270
26
24
17
31
1.97
28201--28422
40
5.6
39
80
8
207
25
21
27
25
1.99
36094--36317
40
5.7
40
82
6
233
25
21
27
25
1.99
36147--36317
79
2.2
79
84
2
227
25
21
28
25
1.99
36173--36350
79
2.2
80
82
3
200
25
21
28
24
1.99

Tables:   1

The End!