Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold324
Parameters: 2 7 7 80 10 50 1000
Length:  35433

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1319--1361
21
2.0
21
86
0
59
25
13
18
41
1.88
2816--2855
21
1.9
21
100
0
80
52
30
5
12
1.60
4730--4771
3
14.0
3
89
0
66
30
2
2
64
1.19
11318--11343
11
2.4
11
100
0
52
15
0
0
84
0.62
11245--11408
86
1.9
85
90
7
260
34
3
0
62
1.10
11346--11413
11
6.5
11
73
20
56
41
2
0
55
1.15
11353--11421
30
2.3
30
82
7
79
40
2
0
56
1.14
15342--15376
15
2.4
14
86
9
52
34
8
11
45
1.71
18984--19040
29
2.0
29
89
0
87
38
22
17
21
1.93
21418--21447
15
2.0
15
100
0
60
26
13
26
33
1.93
21531--21564
16
2.1
16
88
0
50
50
14
17
17
1.79
24362--24402
21
2.0
21
90
0
64
29
21
29
19
1.98
26307--26340
16
2.1
16
88
0
50
50
14
17
17
1.79
30095--30129
17
2.1
17
89
5
54
31
8
2
57
1.44
31007--31045
20
2.0
20
90
5
62
64
0
0
35
0.94
31374--31443
18
3.6
18
76
22
70
41
0
2
55
1.14
31388--31466
18
3.6
23
75
18
87
45
1
2
50
1.23
31374--31485
41
2.7
42
86
4
156
41
1
3
53
1.29

Tables:   1

The End!