Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1485
Parameters: 2 7 7 80 10 50 1000
Length:  33924

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1083--1144
28
2.2
29
82
8
74
62
1
11
24
1.37
2549--2597
24
2.0
25
84
7
66
53
4
2
40
1.32
10311--10537
88
2.6
86
81
4
222
35
19
7
38
1.79
10409--10571
88
1.9
87
91
6
267
36
19
9
34
1.84
10603--10654
20
2.7
20
85
5
72
63
0
1
34
1.06
10972--11114
55
2.6
55
82
6
166
37
1
1
60
1.14
10972--11061
19
4.8
19
74
17
66
35
2
0
62
1.08
10981--11076
9
10.2
10
73
18
73
33
2
0
64
1.05
10988--11076
10
9.4
10
72
17
57
33
2
0
64
1.06
11023--11103
28
2.9
27
73
20
69
39
1
1
58
1.14
12780--12841
28
2.2
29
82
8
74
62
1
11
24
1.37
14684--14808
62
2.0
61
89
4
189
33
9
16
40
1.81
23090--23122
16
2.1
16
88
5
50
69
9
0
21
1.15
23094--23145
13
3.6
14
82
15
54
67
7
0
25
1.17
26045--26081
16
2.4
16
90
4
58
16
2
0
81
0.81
26047--26086
16
2.4
16
83
4
53
15
2
0
82
0.77
27892--28081
90
2.2
88
80
9
201
35
16
8
39
1.80
28522--28618
29
3.3
29
81
4
88
35
5
1
58
1.27
28548--28600
11
5.2
11
73
17
51
30
1
0
67
1.01
28539--28642
11
10.4
11
66
18
50
37
2
0
59
1.12
28539--28642
10
10.4
10
69
15
72
37
2
0
59
1.12
28539--28636
30
3.3
30
81
2
81
38
3
0
58
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33438--33491
20
2.8
18
81
13
63
38
1
3
55
1.28
33445--33482
20
1.9
20
94
0
67
39
0
2
57
1.12

Tables:   1

The End!