Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2011
Parameters: 2 7 7 80 10 50 1000
Length:  12109

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2804--2838
11
3.3
11
96
4
63
17
5
8
68
1.35
3481--3792
40
7.7
40
77
10
292
23
21
25
30
1.99
3462--3803
82
4.2
82
91
1
508
22
19
25
32
1.97
3462--3803
163
2.1
165
90
2
528
22
19
25
32
1.97
3959--4464
44
11.6
45
78
5
473
29
26
16
27
1.97
3966--4458
130
3.8
132
91
2
778
28
27
16
27
1.97
4436--4724
131
2.2
133
90
6
455
30
23
20
26
1.98
4830--4963
42
3.1
42
62
19
105
23
23
26
26
2.00
4672--5017
86
4.1
86
92
2
529
26
24
22
26
2.00
9061--9104
19
2.3
20
84
7
56
40
11
20
27
1.86

Tables:   1

The End!