Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold225
Parameters: 2 7 7 80 10 50 1000
Length:  41640

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--724
27
3.5
27
84
7
118
15
43
21
19
1.87
3191--3290
9
10.6
9
77
14
103
46
18
0
36
1.49
3191--3327
18
7.3
18
75
14
116
45
16
1
36
1.57
3191--3322
63
2.2
61
86
8
180
45
17
0
36
1.54
7412--7719
153
2.0
153
85
3
415
32
7
15
45
1.73
7710--7813
42
2.5
42
85
3
129
29
10
19
40
1.85
10340--10495
82
1.9
81
85
3
215
26
16
28
28
1.97
10339--10492
55
2.9
52
82
7
175
27
16
27
27
1.97
10340--10495
27
5.7
27
81
6
163
26
16
28
28
1.97
10332--10516
27
6.8
27
75
9
101
26
16
28
29
1.97
10332--10516
82
2.3
81
78
2
210
26
16
28
29
1.97
18413--18568
82
1.9
81
85
3
215
26
16
28
28
1.97
18412--18565
55
2.9
52
82
7
175
27
16
27
27
1.97
18413--18568
27
5.7
27
81
6
163
26
16
28
28
1.97
18405--18589
27
6.8
27
75
9
101
26
16
28
29
1.97
18405--18589
82
2.3
81
78
2
210
26
16
28
29
1.97
21664--21717
20
2.7
20
94
0
90
22
31
0
46
1.52
22484--22612
40
3.2
40
85
2
170
38
20
25
15
1.92
22511--22576
20
3.3
20
77
8
80
40
21
25
12
1.88
22500--22612
20
5.7
19
70
15
68
41
20
23
14
1.89
27273--27299
6
4.5
6
100
0
54
70
0
0
29
0.88
37241--37320
41
2.0
40
95
2
142
21
23
20
35
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40854--41312
104
4.5
99
81
12
511
2
2
7
88
0.68
40854--41333
128
3.8
123
81
11
519
2
2
7
87
0.71
40854--41312
1
459.0
1
79
0
432
2
2
7
88
0.68

Tables:   1

The End!