Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold890
Parameters: 2 7 7 80 10 50 1000
Length:  34897

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1491--1646
82
1.9
81
85
3
215
26
16
28
28
1.97
1490--1643
55
2.9
52
82
7
175
27
16
27
27
1.97
1491--1646
27
5.7
27
81
6
163
26
16
28
28
1.97
1483--1667
27
6.8
27
75
9
101
26
16
28
29
1.97
1483--1667
82
2.3
81
78
2
210
26
16
28
29
1.97
9361--9516
82
1.9
81
85
3
215
26
16
28
28
1.97
9360--9513
55
2.9
52
82
7
175
27
16
27
27
1.97
9361--9516
27
5.7
27
81
6
163
26
16
28
28
1.97
9353--9537
27
6.8
27
75
9
101
26
16
28
29
1.97
9353--9537
82
2.3
81
78
2
210
26
16
28
29
1.97
10889--11031
40
3.6
40
84
2
182
25
23
25
25
2.00
19005--19188
40
4.6
40
78
8
194
25
22
26
26
2.00
19011--19163
83
1.8
83
88
0
234
24
22
28
25
1.99
25020--25171
39
3.9
39
93
1
234
28
27
20
23
1.99
25020--25171
77
2.0
78
89
1
234
28
27
20
23
1.99
27559--27617
31
1.9
31
100
0
118
25
16
10
47
1.78
29271--29349
37
2.1
37
90
0
122
25
31
18
24
1.98
29466--29995
47
11.4
47
92
3
833
29
30
8
32
1.87
29517--29995
236
2.1
228
93
3
825
30
29
8
31
1.86
33290--33339
25
2.0
25
81
11
59
30
32
8
30
1.86
33504--33649
36
3.9
39
79
14
164
22
27
23
26
1.99
34022--34099
29
2.7
29
84
7
97
28
32
15
24
1.95

Tables:   1

The End!