Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold935
Parameters: 2 7 7 80 10 50 1000
Length:  38964

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4470--4625
27
5.7
27
78
6
145
27
28
16
28
1.97
4475--4626
54
2.8
55
80
4
182
26
27
16
28
1.97
6931--7110
48
4.0
44
78
12
177
30
22
18
28
1.97
6941--7110
90
1.9
89
83
7
218
29
22
18
29
1.98
14841--14925
27
3.1
27
84
0
116
28
25
12
32
1.93
15075--15144
27
2.6
27
88
0
113
28
25
14
31
1.95
22664--22916
68
3.8
64
76
12
203
24
29
16
29
1.97
23385--23440
29
1.9
29
85
0
76
28
21
7
42
1.79
30141--30191
26
2.0
26
96
0
93
29
35
23
11
1.90
30047--30268
103
2.2
103
92
3
367
31
31
18
18
1.95
30597--30660
30
2.2
29
81
10
76
29
28
6
35
1.82
30604--30660
30
1.9
30
85
3
80
29
24
7
38
1.82
37504--37556
26
2.0
26
92
0
88
28
33
20
16
1.95
37671--37718
23
2.0
24
92
4
80
31
33
25
10
1.89
37588--37779
95
2.0
97
90
6
311
33
26
20
19
1.97
38116--38178
29
2.2
29
81
13
76
30
26
6
36
1.81
38123--38178
29
1.9
30
85
7
80
30
23
7
39
1.81

Tables:   1

The End!