Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold256
Parameters: 2 7 7 80 10 50 1000
Length:  46209

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
727--975
50
4.8
50
85
4
284
20
29
24
26
1.99
726--975
100
2.4
104
88
6
357
20
29
24
26
1.99
1071--1102
13
2.5
13
94
0
55
56
12
0
31
1.37
1314--1371
30
1.9
30
89
0
89
31
24
3
41
1.71
2546--2610
10
6.5
10
71
7
51
69
0
0
30
0.89
2546--2610
30
2.2
30
91
5
105
69
0
0
30
0.89
2634--2717
29
3.1
29
62
22
74
41
0
28
29
1.56
2611--2732
51
2.4
51
94
1
208
42
0
28
28
1.56
2932--2992
29
2.1
28
81
3
68
52
13
8
26
1.67
6846--6945
50
2.0
50
98
0
191
37
14
10
39
1.79
10257--10297
21
2.0
21
90
0
64
19
29
21
29
1.98
19214--19306
42
2.2
42
78
1
96
35
26
13
23
1.93
25724--25762
19
2.1
19
85
9
53
33
5
10
51
1.58
30368--30397
7
4.4
7
91
8
53
73
0
0
26
0.84
30368--30397
13
2.2
14
94
5
53
73
0
0
26
0.84
37444--37480
19
1.9
19
89
10
58
64
16
0
18
1.29
44605--44641
3
12.3
3
100
0
74
32
32
0
35
1.58

Tables:   1

The End!