Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1257
Parameters: 2 7 7 80 10 50 1000
Length:  42074

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2289--2335
20
2.3
20
85
0
67
21
12
36
29
1.91
3989--4094
48
2.2
48
85
9
137
14
24
1
59
1.45
5122--5172
15
3.5
15
78
10
61
3
13
5
76
1.11
5102--5184
29
2.8
29
82
12
91
8
14
4
72
1.25
6673--6719
20
2.3
20
85
0
67
21
12
36
29
1.91
7023--7069
25
2.0
23
83
8
58
68
8
4
19
1.33
16965--17147
79
2.3
81
84
7
232
25
27
22
24
2.00
16944--17147
40
5.1
40
82
8
238
25
27
22
24
2.00
27708--27751
22
2.0
22
90
0
70
25
34
4
36
1.76
28688--28741
23
2.4
22
77
20
58
9
20
1
68
1.27
38072--38116
23
2.0
23
90
0
72
35
4
35
24
1.76
40136--40168
17
1.9
17
88
11
50
24
0
0
75
0.80
40134--40189
28
2.0
27
83
10
69
25
1
1
71
1.05

Tables:   1

The End!