Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1443
Parameters: 2 7 7 80 10 50 1000
Length:  43802

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1988--2208
78
2.8
79
78
9
238
23
22
27
26
2.00
1990--2208
40
5.6
40
81
9
236
24
21
27
26
1.99
12748--12790
22
2.0
22
85
0
59
67
2
23
6
1.27
19240--19351
27
4.1
27
82
11
122
39
22
23
15
1.91
19240--19351
54
2.1
54
83
6
138
39
22
23
15
1.91
20571--20624
22
2.5
22
81
0
63
68
1
24
5
1.21
29271--29318
23
2.1
23
100
0
96
52
8
8
31
1.61
31936--32181
40
6.2
40
92
1
406
27
26
23
23
2.00
33555--33580
13
2.0
13
100
0
52
61
7
0
30
1.24
39391--39556
40
4.2
40
88
2
237
27
25
22
24
2.00
41456--41633
78
2.3
79
82
8
211
25
27
22
24
2.00
41435--41637
40
5.1
40
81
9
229
25
27
22
24
2.00
42788--42959
84
2.1
81
94
4
301
26
26
8
38
1.85

Tables:   1

The End!