Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3055
Parameters: 2 7 7 80 10 50 1000
Length:  31547

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
361--928
285
2.0
290
91
4
925
42
12
15
29
1.84
7591--7640
15
3.3
15
86
5
57
62
6
6
26
1.42
8710--8740
12
2.6
12
89
0
53
0
6
35
58
1.24
8900--9000
43
2.3
43
81
6
116
26
27
13
31
1.94
9363--9521
44
3.6
43
74
9
144
26
24
20
28
1.99
9655--10322
45
14.9
45
86
3
911
30
25
16
27
1.96
11642--11697
6
10.0
6
77
14
57
1
14
1
82
0.84
11643--11699
11
5.3
10
82
15
69
1
12
1
84
0.79
11642--11699
21
2.6
22
89
5
82
1
13
1
82
0.82
21496--21787
17
16.5
17
69
19
136
44
10
11
32
1.76
21484--21790
18
17.3
18
73
11
224
45
11
12
30
1.77
21485--21787
35
8.6
35
73
12
196
45
11
12
31
1.77
21484--21770
53
5.4
52
73
13
201
45
11
11
31
1.76
21526--21790
71
3.7
68
77
11
200
45
10
12
31
1.75
21745--21801
18
3.2
18
78
14
64
35
8
15
40
1.79
21985--22028
20
2.1
21
91
4
72
31
9
11
47
1.71
22346--22415
9
7.3
10
72
22
53
0
20
2
77
0.90
22346--22394
18
2.8
17
87
6
71
0
16
2
81
0.78
22355--22386
15
2.1
16
94
5
57
0
15
0
84
0.63
22346--22421
20
4.1
19
72
16
70
0
19
2
77
0.88
22657--22757
7
14.0
7
71
17
57
0
23
0
75
0.87
22695--22750
4
14.8
4
77
17
57
1
19
0
78
0.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22658--22759
11
9.5
11
78
15
99
0
24
0
74
0.88
23098--23223
29
4.3
30
77
7
123
46
7
16
30
1.74
23098--23223
59
2.1
59
80
0
153
46
7
16
30
1.74
23449--24197
78
9.5
79
83
7
762
34
19
16
29
1.94
23449--24197
237
3.2
237
83
7
871
34
19
16
29
1.94

Tables:   1

The End!