Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2004
Parameters: 2 7 7 80 10 50 1000
Length:  38500

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--397
39
5.5
40
87
10
289
25
27
22
23
2.00
189--396
79
2.7
77
89
8
304
25
27
22
24
1.99
8153--8370
40
5.5
40
88
2
298
24
27
23
24
2.00
24169--24209
22
1.9
21
85
5
55
21
26
41
9
1.84
27655--27838
27
6.8
27
86
2
199
38
21
15
24
1.92
27655--27838
81
2.3
81
87
1
253
38
21
15
24
1.92
30395--30759
103
3.6
103
94
2
614
30
29
20
19
1.97
30630--30681
26
2.0
26
96
0
95
28
34
23
13
1.92
31087--31150
30
2.2
29
81
10
76
29
28
6
35
1.82
31094--31150
30
1.9
30
85
3
80
29
24
7
38
1.82
37974--38248
93
2.9
95
86
13
402
30
32
18
18
1.95
37966--38319
103
3.6
100
84
12
464
31
31
19
18
1.96
38436--38482
20
2.3
21
78
10
53
57
14
0
27
1.38

Tables:   1

The End!