Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3081
Parameters: 2 7 7 80 10 50 1000
Length:  17820

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1865--1918
20
2.7
20
82
0
63
24
20
18
37
1.94
1865--1938
30
2.5
30
86
8
98
21
20
18
39
1.93
1865--1929
20
3.2
20
71
16
53
23
21
16
38
1.93
3494--3551
11
4.8
11
78
14
53
72
1
8
17
1.18
3493--3550
12
4.7
12
78
16
64
74
1
8
15
1.14
3490--3528
15
2.6
15
83
0
51
76
0
7
15
0.99
3489--3550
27
2.3
27
77
0
79
75
1
8
14
1.10
4624--4742
12
9.6
12
72
16
66
72
4
17
5
1.21
4628--4730
18
5.6
18
72
7
73
71
3
17
6
1.23
4624--4730
6
17.7
6
68
8
65
71
3
17
6
1.22
4691--4728
13
2.8
13
82
17
51
73
0
18
7
1.06
4692--4742
21
2.4
21
74
6
50
74
1
17
5
1.11
4745--4807
33
1.9
33
84
12
85
55
6
25
12
1.60
6584--6637
20
2.7
20
82
0
63
24
20
18
37
1.94
6584--6657
30
2.5
30
86
8
98
21
20
18
39
1.93
6584--6648
20
3.2
20
71
16
53
23
21
16
38
1.93
9621--9659
14
2.7
15
96
4
71
20
12
5
61
1.50
14763--14808
20
2.3
20
80
0
56
23
13
32
30
1.93

Tables:   1

The End!