Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3627
Parameters: 2 7 7 80 10 50 1000
Length:  26809

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2369--2464
41
2.3
40
81
8
113
71
7
8
12
1.29
3483--3591
6
17.7
6
67
16
62
74
3
16
5
1.15
3492--3591
18
5.3
18
75
8
74
74
3
17
6
1.15
3553--3608
14
4.2
13
76
14
53
73
1
16
8
1.17
3553--3608
26
2.1
26
86
3
76
73
1
16
8
1.17
3605--3666
33
1.9
32
83
9
81
53
6
27
12
1.63
5673--5730
29
2.0
30
82
3
73
31
3
10
55
1.50
8700--8752
22
2.4
21
84
6
61
35
32
3
28
1.75
8705--8767
21
3.0
21
88
2
81
33
30
4
31
1.78
9423--9505
41
2.0
41
85
0
112
43
13
14
28
1.83
9625--9677
27
2.0
27
85
7
72
28
9
33
28
1.88
9641--9693
27
2.0
27
84
0
70
30
11
28
30
1.91
10548--10634
29
3.0
30
67
17
83
32
8
11
48
1.68
11928--11969
22
1.9
22
95
0
75
76
9
0
14
1.02
11928--11971
11
4.1
11
86
13
65
72
9
0
18
1.10
12008--12049
16
2.6
16
100
0
84
66
4
11
16
1.40
25297--25524
88
2.7
83
84
5
269
43
10
11
33
1.76

Tables:   1

The End!