Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold250
Parameters: 2 7 7 80 10 50 1000
Length:  28827

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1029--1111
28
3.0
28
91
3
132
21
25
21
31
1.98
1029--1144
56
2.1
55
80
9
128
19
23
21
35
1.96
7892--7947
27
2.1
27
96
0
103
30
16
17
35
1.92
10964--11016
27
2.0
27
84
0
70
32
15
18
33
1.92
10999--11068
26
2.6
27
79
4
88
38
17
8
35
1.80
11049--11164
27
4.3
26
79
6
124
42
23
7
26
1.81
11044--11148
54
1.9
54
84
3
140
41
22
7
27
1.81
11049--11179
54
2.4
55
78
7
135
41
23
8
26
1.83
11130--11197
27
2.5
27
87
0
100
44
22
7
26
1.79
14508--14852
54
6.4
55
79
5
274
42
20
9
27
1.83
14465--14800
81
4.2
82
74
10
289
41
20
10
28
1.84
14465--14854
54
7.2
54
77
6
272
41
20
10
28
1.84
14465--14861
27
14.7
27
78
5
239
40
19
10
29
1.85
15119--15238
41
2.9
41
83
4
154
20
20
29
30
1.98
15388--15429
22
1.9
22
90
0
66
21
30
19
28
1.97
15399--15447
22
2.2
22
85
0
62
24
28
20
26
1.99
18421--18493
31
2.3
32
92
2
121
39
5
50
4
1.44
20038--20100
33
1.9
33
93
0
108
41
9
23
25
1.85
23483--23665
40
4.6
39
82
4
197
26
27
20
25
1.99
23597--23674
40
1.9
41
82
10
97
26
28
20
24
1.99

Tables:   1

The End!