Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1985
Parameters: 2 7 7 80 10 50 1000
Length:  37932

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1373--1553
40
4.6
40
84
2
222
27
25
22
24
2.00
1373--1553
80
2.3
80
88
2
258
27
25
22
24
2.00
11083--11128
21
2.3
20
78
14
51
45
17
6
30
1.73
11969--12004
12
3.0
12
95
0
63
52
0
0
47
1.00
11950--12015
22
3.0
22
76
6
62
56
1
1
40
1.18
23746--23901
82
1.9
81
85
3
215
26
16
28
28
1.97
23745--23898
55
2.9
52
82
7
175
27
16
27
27
1.97
23746--23901
27
5.7
27
81
6
163
26
16
28
28
1.97
23738--23922
27
6.8
27
75
9
101
27
15
28
29
1.96
23738--23922
82
2.3
81
77
2
201
27
15
28
29
1.96
26882--27102
40
5.6
40
91
1
329
25
25
23
24
2.00
31436--31616
80
2.3
80
83
9
219
27
27
20
23
1.99
31433--31616
40
4.6
40
81
7
196
28
27
20
23
1.99
37128--37305
40
4.6
40
90
5
267
25
26
23
24
2.00
37156--37301
78
1.9
79
94
1
258
24
28
23
23
2.00

Tables:   1

The End!