Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2565
Parameters: 2 7 7 80 10 50 1000
Length:  21775

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3471--3528
10
5.7
10
76
11
64
29
27
13
29
1.94
3471--3531
20
3.0
20
83
9
79
27
26
13
32
1.93
4860--4917
12
4.6
12
78
16
55
74
6
5
13
1.20
4948--4982
9
3.8
9
88
3
52
85
2
8
2
0.79
4928--4991
21
3.0
21
82
11
69
78
3
14
4
1.04
5859--5893
18
1.9
18
88
11
54
57
0
20
22
1.41
7958--8015
10
5.7
10
76
11
64
29
27
13
29
1.94
7958--8018
20
3.0
20
83
9
79
27
26
13
32
1.93
12943--12995
23
2.4
22
76
20
56
9
18
1
69
1.25
17803--17837
18
1.9
18
88
11
54
22
20
0
57
1.41
18757--18782
1
26.0
1
100
0
52
0
0
0
100
0.00

Tables:   1

The End!