Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1894
Parameters: 2 7 7 80 10 50 1000
Length:  39191

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6713--6929
40
5.4
40
84
7
278
25
26
23
23
2.00
6713--6929
83
2.7
80
87
4
285
25
26
23
23
2.00
12246--12289
21
2.2
20
84
12
54
43
11
9
36
1.72
20721--20799
31
2.5
31
95
0
140
27
25
18
27
1.98
21017--21139
26
4.8
26
87
1
169
27
22
21
27
1.99
21011--21139
52
2.5
51
92
3
217
27
21
20
29
1.98
21207--21244
11
3.6
11
86
13
62
31
18
13
36
1.89
21189--21244
20
2.8
20
89
10
80
30
17
16
35
1.92
21291--21338
25
1.9
25
86
0
69
27
14
22
35
1.93
21946--22047
27
3.8
26
72
12
80
23
20
19
36
1.95
22064--22373
27
11.4
27
73
8
112
31
9
20
39
1.83
22154--22332
54
3.3
53
79
9
193
27
10
21
40
1.85
22352--22641
27
10.7
27
91
0
409
40
9
23
27
1.85
22154--22400
134
1.8
134
79
1
289
31
9
21
38
1.85
24764--24803
20
2.0
20
90
4
64
50
22
2
25
1.62
29607--29784
27
6.6
27
83
3
205
26
15
28
29
1.96
29608--29763
82
1.9
81
88
3
233
26
15
28
29
1.96
29604--29784
82
2.2
81
83
2
229
27
15
27
29
1.96
37714--37890
27
6.6
27
83
4
196
27
15
27
29
1.96
37715--37869
82
1.9
80
86
5
222
27
15
27
29
1.96
37711--37890
82
2.2
81
82
3
220
27
15
27
30
1.96

Tables:   1

The End!