Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1480
Parameters: 2 7 7 80 10 50 1000
Length:  22953

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
266--319
20
2.8
19
80
5
65
24
29
11
35
1.90
2335--2512
27
6.6
27
83
3
205
26
15
28
29
1.96
2336--2491
82
1.9
81
88
3
233
26
15
28
29
1.96
2332--2512
82
2.2
81
83
2
229
27
15
27
29
1.96
10407--10469
13
4.9
12
82
16
65
17
7
1
73
1.16
10410--10459
14
3.6
13
91
8
73
16
8
0
76
1.02
10407--10459
27
2.0
27
92
0
88
18
9
0
71
1.12
13757--13803
20
2.3
20
85
0
67
29
36
12
21
1.91
15204--15248
21
2.2
20
88
4
63
73
8
4
13
1.23
15224--15253
13
2.2
13
94
5
51
76
6
3
13
1.11
15233--15313
42
1.9
42
80
9
94
74
3
13
8
1.19
16315--16355
21
2.0
21
85
0
55
78
4
12
4
1.07
16523--16628
48
2.2
47
85
9
135
59
1
24
14
1.45
18296--18342
20
2.3
20
85
0
67
29
36
12
21
1.91

Tables:   1

The End!