Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold562
Parameters: 2 7 7 80 10 50 1000
Length:  31143

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13480--13506
12
2.2
12
100
0
54
22
14
14
48
1.81
19911--19985
20
3.8
20
74
13
64
40
18
18
22
1.92
19911--19985
30
2.5
30
80
4
89
40
18
18
22
1.92
21803--21883
12
6.8
12
69
17
53
12
24
1
61
1.38
21818--21873
18
3.0
20
68
26
59
10
26
0
62
1.28
21913--21959
15
3.1
16
81
9
53
12
19
0
68
1.21
21913--21969
28
2.0
29
83
13
73
12
19
0
68
1.20
22326--22422
30
3.2
30
73
2
97
26
26
17
28
1.98
23322--23370
20
2.3
20
82
10
53
32
8
14
44
1.74
24129--24171
11
3.9
11
84
0
59
79
2
2
16
0.95
24130--24175
22
2.1
22
95
0
83
76
4
4
15
1.11
25088--25149
5
12.0
5
76
19
56
75
1
19
3
1.02
25088--25149
26
2.4
26
81
5
81
75
1
19
3
1.02
25076--25151
31
2.5
30
73
23
77
73
2
19
3
1.11
25197--25227
12
2.6
12
100
0
62
45
12
16
25
1.83
25230--25261
12
2.8
12
95
4
57
78
0
15
6
0.95
27361--27457
30
3.2
30
73
2
97
26
26
17
28
1.98
28353--28401
20
2.3
20
82
10
53
32
8
14
44
1.74
29817--29884
33
2.1
33
83
10
86
4
14
4
76
1.10
29864--29932
12
5.4
13
73
11
54
17
5
4
72
1.21

Tables:   1

The End!