Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3096
Parameters: 2 7 7 80 10 50 1000
Length:  38681

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--8002
7
1151.3
7
97
2
14840
42
42
0
14
1.45
7640--7690
5
10.0
5
95
4
93
41
58
0
0
0.98
8016--8077
22
2.7
23
83
9
74
35
29
20
14
1.93
8068--8152
20
4.3
20
83
8
120
32
32
23
10
1.89
8000--8141
20
7.1
18
77
14
88
36
29
22
11
1.89
8000--8152
39
3.8
39
75
13
114
36
30
21
11
1.89
10047--10696
325
2.0
324
97
0
1228
48
13
18
18
1.81
17671--17736
31
2.1
31
97
0
123
24
21
19
34
1.96
21183--21454
136
2.0
136
99
0
535
32
18
16
32
1.93
25542--25574
14
2.4
14
90
5
50
30
0
0
69
0.88
26018--26064
19
2.5
19
80
13
53
14
4
6
74
1.17
38037--38299
85
3.1
82
76
12
219
30
23
23
22
1.99

Tables:   1

The End!