Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2806
Parameters: 2 7 7 80 10 50 1000
Length:  22541

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--673
46
14.6
46
81
11
715
34
7
28
29
1.85
2--673
231
2.9
228
83
11
806
34
7
28
29
1.85
1089--1611
47
11.1
47
93
4
880
29
29
7
33
1.85
3097--3121
13
1.9
13
100
0
50
36
16
16
32
1.90
3719--3799
40
2.1
39
97
2
153
22
20
17
39
1.92
5341--5921
40
14.6
40
91
2
893
26
28
20
24
1.99
7382--8396
47
21.6
47
95
1
1800
29
29
8
32
1.86
9908--9932
13
1.9
13
100
0
50
36
16
16
32
1.90
11859--11927
27
2.6
27
90
0
102
30
28
14
26
1.95
12684--12722
2
19.5
2
94
0
60
46
0
5
48
1.24
19985--20052
26
2.6
27
88
2
93
29
29
14
26
1.95
20802--20836
2
17.5
2
93
0
52
45
0
5
48
1.26
21554--21600
24
2.0
24
84
12
62
12
17
0
70
1.17

Tables:   1

The End!