Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2908
Parameters: 2 7 7 80 10 50 1000
Length:  30285

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--165
13
4.3
13
77
12
55
72
1
17
8
1.18
162--223
33
1.9
32
84
15
83
54
6
25
12
1.62
1959--2012
20
2.7
20
82
0
63
24
20
18
37
1.94
1959--2032
30
2.5
30
86
8
98
21
20
18
39
1.93
1959--2023
20
3.2
20
71
16
53
23
21
16
38
1.93
7258--7286
13
2.2
13
100
0
58
27
0
10
62
1.28
9297--9322
13
2.0
13
100
0
52
46
7
0
46
1.31
16361--16457
30
3.2
31
73
5
101
27
28
15
27
1.96
18158--18207
21
2.5
20
87
6
73
18
22
20
40
1.92
18428--18456
13
2.2
13
100
0
58
27
0
10
62
1.28
18499--18532
17
2.1
17
88
5
52
32
11
32
23
1.91
20832--20981
67
2.2
67
81
8
171
32
17
28
21
1.96
20856--21039
67
2.8
64
76
8
185
30
17
29
22
1.97
23660--23757
30
3.3
30
72
4
90
27
26
16
29
1.97
25400--25481
42
2.0
42
82
0
101
67
6
7
19
1.37
25443--25481
19
2.2
18
86
9
53
71
2
7
17
1.21
27350--27511
46
3.5
46
76
15
181
28
29
21
20
1.98
27935--27993
29
2.0
30
86
3
84
30
25
6
37
1.82

Tables:   1

The End!