Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3750
Parameters: 2 7 7 80 10 50 1000
Length:  40585

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1209--1468
102
2.6
101
87
6
364
30
29
20
19
1.97
7599--7648
26
1.9
26
95
0
91
12
24
34
30
1.91
7521--7784
103
2.6
103
89
4
399
20
20
29
29
1.97
9005--9171
79
2.1
79
87
0
235
22
34
7
35
1.83
22743--22794
24
2.2
24
82
6
61
32
1
1
63
1.16
28031--28058
11
2.5
11
100
0
56
75
0
0
25
0.81
28788--28835
16
3.1
15
90
6
69
64
2
2
31
1.16
28784--28839
24
2.3
24
81
6
69
66
1
1
30
1.12
28784--28835
8
6.5
8
82
8
61
65
1
1
30
1.14
28966--29051
22
3.7
23
79
8
86
53
5
8
32
1.54
28987--29035
25
2.0
25
91
0
80
51
6
8
34
1.57
30453--30487
13
2.8
13
86
4
54
62
5
14
17
1.49
30469--30780
70
4.2
71
82
10
328
34
20
17
26
1.95
30687--30714
13
2.2
13
100
0
56
64
7
14
14
1.48
30612--30766
83
1.9
83
91
5
260
34
20
16
27
1.95
30735--30835
52
1.9
52
92
7
170
40
17
11
29
1.86
30915--31075
67
2.4
68
91
5
254
31
21
16
30
1.95
30695--31022
120
2.7
120
90
6
522
37
19
16
26
1.93
39285--39320
12
3.0
12
83
0
54
44
2
22
30
1.67

Tables:   1

The End!