Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold966
Parameters: 2 7 7 80 10 50 1000
Length:  30887

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1548--1605
20
3.2
18
79
11
64
74
1
6
17
1.12
1569--1605
17
2.2
17
90
9
58
78
2
8
10
1.06
2644--2725
30
2.7
31
81
5
96
65
1
21
10
1.30
2649--2718
24
2.9
24
74
6
61
62
1
24
11
1.36
13876--13928
23
2.4
22
76
20
56
9
18
1
69
1.25
15353--15471
12
9.6
12
70
16
57
71
4
18
5
1.23
15340--15479
41
3.5
39
77
14
133
69
3
19
7
1.28
15353--15459
6
17.7
6
66
8
56
71
3
18
6
1.24
15420--15457
13
2.8
13
82
17
51
73
0
18
7
1.06
15339--15457
12
10.0
12
67
21
54
69
3
18
8
1.28
15421--15471
21
2.4
21
74
6
50
74
1
17
5
1.11
15474--15536
33
1.9
33
84
12
85
53
6
26
12
1.62
17312--17365
20
2.7
20
82
0
63
24
20
18
37
1.94
17312--17385
30
2.5
30
86
8
98
21
20
18
39
1.93
17312--17376
20
3.2
20
71
16
53
23
21
16
38
1.93
22634--22662
13
2.2
13
100
0
58
27
0
10
62
1.28
24674--24699
13
2.0
13
100
0
52
46
7
0
46
1.31

Tables:   1

The End!