Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1388
Parameters: 2 7 7 80 10 50 1000
Length:  16732

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3722--3783
27
2.3
27
88
0
88
19
24
19
37
1.94
3768--3819
27
1.9
27
84
0
68
21
15
15
48
1.81
3768--3827
27
2.2
27
81
0
66
21
16
15
46
1.83
6477--6931
47
9.6
47
93
2
750
29
29
8
32
1.87
6477--6931
96
4.8
96
93
3
753
29
29
8
32
1.87
6477--6931
143
3.2
142
94
2
754
29
29
8
32
1.87
11193--11386
40
4.9
40
85
3
250
24
28
22
24
2.00
11206--11502
40
7.6
39
79
11
245
24
27
23
24
2.00
11193--11423
117
2.0
118
81
4
279
24
28
22
24
1.99
11361--11502
38
3.6
39
77
13
148
23
26
23
26
2.00
11809--11887
29
2.7
29
86
5
106
27
32
15
24
1.95
11869--12012
43
3.4
43
97
1
265
27
35
14
22
1.93
13431--13600
47
3.6
47
90
1
250
28
30
8
32
1.86

Tables:   1

The End!