Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3422
Parameters: 2 7 7 80 10 50 1000
Length:  37494

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9616--9824
41
5.2
40
85
3
116
25
26
23
23
2.00
9639--9824
41
4.6
41
87
3
243
24
25
24
24
2.00
9639--9822
81
2.3
82
83
5
239
24
26
25
24
2.00
13367--13474
40
2.7
40
84
5
137
26
25
25
22
2.00
21322--21507
41
4.6
41
85
3
225
25
24
24
25
2.00
21324--21477
81
1.9
82
86
4
222
24
24
24
26
2.00
22956--23063
36
2.9
36
80
11
105
39
1
2
55
1.25
23278--23311
15
2.3
15
89
0
50
35
2
23
38
1.70
25560--26370
140
5.9
139
81
6
808
27
19
22
30
1.98
26002--26230
126
1.8
126
85
3
327
25
20
23
29
1.99
26128--26401
139
2.0
140
82
3
338
28
21
19
30
1.98
25882--26509
265
2.4
263
78
6
629
28
20
20
31
1.97
30229--30276
25
1.9
25
91
0
78
35
25
14
25
1.94
30324--30379
11
5.5
11
71
16
57
35
12
19
32
1.89
30313--30379
20
3.3
20
93
0
116
34
11
20
32
1.90
30429--30546
23
5.0
24
86
6
152
29
23
21
25
1.99
30428--30546
24
5.0
24
83
7
136
30
23
21
25
1.99
30428--30546
47
2.5
47
86
8
152
30
23
21
25
1.99

Tables:   1

The End!