Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3009
Parameters: 2 7 7 80 10 50 1000
Length:  24844

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
902--934
16
2.1
16
100
0
66
48
18
6
27
1.71
3672--3741
31
2.3
31
82
0
86
28
25
20
25
1.99
3696--3787
46
2.0
46
86
0
130
28
23
21
26
1.99
3742--3800
31
1.9
31
92
0
100
27
23
18
30
1.98
3780--4106
50
6.5
50
94
0
546
26
21
15
36
1.94
8595--8663
27
2.4
28
79
15
79
39
36
5
18
1.75
9718--9748
12
2.6
12
94
0
53
0
25
0
74
0.82
19957--20014
30
1.9
30
89
0
89
41
3
24
31
1.71
20226--20257
13
2.5
13
94
0
55
31
0
12
56
1.37
20352--20593
50
4.7
50
86
4
297
26
24
29
19
1.99
20352--20601
100
2.4
103
88
6
364
26
24
29
20
1.99
22410--22470
2
30.5
2
83
6
79
3
47
3
45
1.35

Tables:   1

The End!