Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold667
Parameters: 2 7 7 80 10 50 1000
Length:  59599

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2586--2716
40
3.3
39
84
4
172
29
26
19
24
1.99
2549--2769
80
2.8
80
79
7
193
27
27
20
24
1.99
2589--2769
80
2.3
80
83
9
210
27
27
20
24
1.99
2590--2769
40
4.5
40
80
8
163
27
27
20
24
1.99
9139--9362
46
4.8
45
77
10
186
28
19
30
21
1.98
21241--21419
50
3.5
50
86
3
225
30
27
15
26
1.96
28553--28707
66
2.3
66
81
7
172
20
29
17
32
1.96
29274--29334
30
2.0
30
87
0
86
29
24
8
37
1.84
37803--38021
40
5.5
40
92
0
357
25
26
21
25
2.00
39997--40164
47
3.6
47
90
0
255
27
30
8
33
1.86
40389--40480
39
2.3
39
88
5
132
25
28
22
23
2.00
40370--40530
40
4.1
40
79
10
170
24
27
22
25
2.00
46584--46754
46
3.7
46
80
6
202
28
19
28
23
1.98
46586--46797
46
4.6
45
79
6
167
28
19
27
24
1.99
54760--54785
9
2.9
9
100
0
52
46
19
34
0
1.50
56468--56659
40
4.8
40
86
1
251
23
20
29
26
1.99
58964--59345
40
9.5
40
90
5
592
25
29
21
22
1.99
58964--59345
126
3.2
125
90
6
576
25
29
21
22
1.99
58987--59345
166
2.2
162
91
5
568
25
30
22
22
1.99
59153--59345
77
2.5
80
92
5
322
25
29
22
22
1.99

Tables:   1

The End!