Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3147
Parameters: 2 7 7 80 10 50 1000
Length:  44051

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5629--5815
39
4.7
39
86
7
168
25
22
27
24
2.00
5629--5852
40
5.7
40
86
6
271
25
22
27
25
2.00
5636--5885
79
3.2
78
80
12
260
27
21
26
25
1.99
8563--8617
27
2.0
27
85
0
74
14
21
23
40
1.90
8732--8809
21
3.7
21
92
0
120
8
2
47
41
1.49
10971--11035
25
2.7
25
78
4
62
44
0
0
55
0.99
26453--26523
32
2.2
32
94
0
124
28
15
26
29
1.96
26453--26542
32
2.8
32
90
5
121
28
15
27
27
1.96
33328--33894
47
12.1
47
96
0
974
28
30
8
31
1.88
37303--37441
40
3.5
38
76
7
125
24
26
23
25
2.00
37739--37817
29
2.7
29
86
5
106
27
32
15
24
1.95
37799--37944
43
3.4
43
100
0
292
26
35
15
22
1.94
39935--40248
47
6.8
47
92
2
483
28
29
8
33
1.87
39935--40248
93
3.4
93
92
1
488
28
29
8
33
1.87
39935--40248
140
2.3
140
89
2
472
28
29
8
33
1.87
43954--44031
24
3.2
24
67
15
63
29
3
32
34
1.76
43807--44049
47
5.4
47
79
15
232
32
7
30
29
1.85

Tables:   1

The End!