Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2171
Parameters: 2 7 7 80 10 50 1000
Length:  14695

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1371--1553
40
4.7
40
82
9
216
25
27
22
24
2.00
1371--1553
78
2.3
81
80
10
209
25
27
22
24
2.00
2683--2801
55
2.1
56
96
1
222
21
23
9
45
1.81
9255--9478
40
5.7
40
85
5
278
25
28
21
24
1.99
9255--9478
79
2.8
80
84
6
269
25
28
21
24
1.99
9257--9478
119
1.9
119
83
5
297
25
27
21
24
1.99
10603--10721
55
2.1
56
98
1
231
22
23
9
44
1.81
11731--11912
39
4.7
40
81
10
182
24
21
27
26
1.99
11731--11886
78
2.0
80
83
7
203
24
21
27
26
1.99
11765--11935
77
2.2
78
81
8
197
27
20
25
26
1.99

Tables:   1

The End!