Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2801
Parameters: 2 7 7 80 10 50 1000
Length:  41991

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7640--7752
56
2.0
56
87
3
165
28
17
25
28
1.98
7696--8393
74
9.4
73
84
7
811
29
17
22
31
1.96
7696--8526
146
5.7
146
81
8
900
29
17
21
31
1.96
8054--8347
159
1.9
159
89
2
466
28
17
22
31
1.97
8272--8511
128
1.9
129
88
2
367
31
17
18
32
1.95
9870--9907
18
2.1
18
90
0
58
0
50
0
50
1.00
9874--9906
11
2.9
12
91
8
52
0
51
0
48
1.00
10365--10435
3
23.3
3
71
8
54
30
2
5
60
1.34
10378--10438
23
2.8
22
85
5
70
32
3
8
55
1.45
10401--10446
23
2.0
23
83
8
58
30
2
10
56
1.46
29185--29340
43
3.6
42
77
6
125
23
16
27
32
1.96
30025--30165
44
3.2
44
85
3
194
31
4
22
40
1.75
32009--32109
30
3.4
30
94
0
175
27
49
3
18
1.65
32009--32155
30
4.9
29
84
5
170
27
47
4
21
1.68
32743--32897
25
6.1
25
74
8
93
32
6
3
57
1.42
32747--32800
15
3.5
16
73
19
51
33
3
0
62
1.12
32834--32908
25
3.1
24
80
5
71
32
5
5
57
1.44
33032--33079
16
3.1
15
90
6
69
31
2
2
64
1.16
33032--33083
8
6.5
8
82
8
61
30
1
1
65
1.14

Tables:   1

The End!