Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1703
Parameters: 2 7 7 80 10 50 1000
Length:  34512

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
943--978
19
1.9
19
88
5
56
27
33
11
27
1.91
1394--1487
29
3.2
30
72
10
88
27
13
29
28
1.94
2580--2613
11
3.1
11
100
0
68
70
11
0
17
1.16
3539--3592
5
11.0
5
75
25
53
77
0
18
3
0.91
3539--3592
15
3.7
15
83
14
76
77
0
18
3
0.91
3673--3697
12
2.1
12
100
0
50
76
0
16
8
1.02
3667--3722
18
3.1
18
76
5
51
69
3
19
7
1.27
3674--3755
29
2.8
29
77
14
96
63
1
23
12
1.35
5857--5953
30
3.2
31
73
5
101
27
28
15
27
1.96
18389--18464
23
3.2
25
62
24
63
28
13
34
23
1.92
18385--18609
47
4.7
48
84
8
223
34
9
27
28
1.88
18757--18901
37
3.9
37
97
0
263
23
19
31
25
1.98
20166--20509
40
8.7
40
90
0
498
24
21
28
25
1.99
23808--23959
27
5.6
27
93
3
241
30
28
13
26
1.94
23808--23959
55
2.8
55
94
0
259
30
28
13
26
1.94
31853--31975
27
4.6
27
93
3
194
30
29
13
26
1.94
31853--31975
55
2.3
53
91
2
192
30
29
13
26
1.94

Tables:   1

The End!