Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1223
Parameters: 2 7 7 80 10 50 1000
Length:  19768

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1439--1662
104
2.2
104
93
1
378
31
31
19
17
1.95
1991--2054
30
2.2
29
81
10
76
29
28
6
35
1.82
1998--2054
30
1.9
30
85
3
80
29
24
7
38
1.82
8909--8960
26
2.0
26
92
0
86
28
34
21
15
1.94
8921--9070
70
2.1
71
92
1
248
30
30
16
23
1.96
8990--9210
103
2.2
102
93
2
372
31
31
18
18
1.95
9083--9133
26
2.0
26
96
0
93
29
35
23
11
1.90
9537--9600
30
2.2
29
81
10
76
29
28
6
35
1.82
9544--9600
30
1.9
30
85
3
80
29
24
7
38
1.82
16084--16234
71
2.1
72
91
2
243
30
29
16
23
1.96
16154--16376
104
2.2
103
92
2
367
31
31
18
17
1.95
16705--16768
30
2.2
29
81
10
76
29
28
6
35
1.82
16712--16768
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!