Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold909
Parameters: 2 7 7 80 10 50 1000
Length:  34715

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9373--9426
23
2.3
23
80
3
54
48
12
5
33
1.65
9812--9846
13
2.7
13
95
0
61
62
5
0
31
1.18
11440--11517
30
2.6
30
70
0
75
28
28
15
28
1.96
11936--11960
13
1.9
13
100
0
50
16
32
16
36
1.90
12484--12548
32
2.0
32
100
0
130
16
21
21
40
1.92
14073--14123
10
5.0
10
81
11
50
9
23
17
49
1.77
18171--18230
30
2.0
31
83
3
77
41
16
25
16
1.89
20069--20102
18
1.9
18
88
5
52
23
20
0
55
1.43
20090--20194
6
17.2
6
66
9
52
7
17
3
71
1.25
20060--20126
29
2.4
28
82
9
84
13
19
0
67
1.23
20141--20194
6
9.2
6
75
4
56
3
14
5
75
1.12
21211--21235
10
2.5
10
100
0
50
0
12
0
88
0.53
21259--21298
10
3.9
10
83
6
53
10
5
7
77
1.11
21269--21297
11
2.6
11
100
0
58
6
6
6
79
1.06
31970--32066
30
3.2
30
70
8
81
27
14
28
28
1.95
33017--33053
10
3.6
10
92
7
65
16
2
8
72
1.19
33003--33053
11
4.5
11
85
9
68
17
3
7
70
1.27
33001--33033
13
2.6
13
85
4
50
18
3
6
72
1.18

Tables:   1

The End!