Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold836
Parameters: 2 7 7 80 10 50 1000
Length:  56142

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--591
39
4.7
40
79
10
200
26
27
22
23
2.00
1697--1865
53
3.1
56
94
5
301
23
24
8
44
1.80
3273--3531
43
6.0
43
91
0
412
32
31
25
10
1.90
3497--3557
27
2.3
26
97
2
113
34
36
21
8
1.83
12056--12257
27
7.4
27
83
5
192
29
28
14
27
1.95
12056--12256
54
3.7
53
82
4
233
29
28
14
26
1.96
12107--12256
81
1.9
81
87
2
221
27
28
16
28
1.97
20147--20350
27
7.6
27
86
3
205
29
28
15
26
1.96
20147--20349
54
3.8
53
83
4
246
29
29
15
26
1.96
44449--44558
10
10.7
10
67
27
54
63
0
2
32
1.15
44449--44532
35
2.4
34
86
6
105
65
1
2
30
1.13
44483--44512
15
2.0
15
93
0
51
70
0
0
30
0.88
44507--44554
23
2.1
22
84
3
60
64
0
4
31
1.12
44497--44558
10
6.0
10
74
18
56
61
0
3
35
1.12
44483--44565
33
2.5
33
75
15
80
65
0
3
31
1.10
44506--44571
20
3.0
23
70
17
59
59
0
6
34
1.22
45580--45726
40
3.7
40
89
0
213
32
26
19
21
1.97
48716--48941
40
5.7
40
85
4
253
25
21
25
27
1.99
48769--48964
80
2.5
80
83
5
238
27
20
24
28
1.99
49183--49220
17
2.2
18
86
13
62
44
5
15
34
1.69
49189--49221
17
1.9
17
100
0
66
45
6
18
30
1.73

Tables:   1

The End!