Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3504
Parameters: 2 7 7 80 10 50 1000
Length:  45576

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1737--1914
27
6.6
27
75
11
114
29
28
15
26
1.96
9728--9905
27
6.6
27
86
3
214
29
28
14
26
1.95
17646--17822
27
6.6
27
84
2
203
29
28
15
27
1.96
17667--17821
81
1.9
81
88
2
231
29
28
15
27
1.96
23758--23829
37
1.9
37
94
0
126
27
30
19
22
1.98
23975--24160
100
1.9
96
87
6
275
30
25
6
36
1.83
23975--24161
48
3.8
48
85
5
250
31
25
6
36
1.83
24154--24248
47
2.0
47
91
0
154
25
30
12
31
1.93
24168--24277
47
2.3
47
85
0
148
27
30
9
32
1.88
26570--26750
85
2.1
85
97
0
344
27
27
8
37
1.85
27418--27451
16
2.1
16
88
0
50
55
14
5
23
1.61
27555--27583
14
2.0
15
93
6
51
55
20
0
24
1.44
29104--29281
27
6.6
27
84
3
205
29
28
15
26
1.96
29125--29280
82
1.9
81
88
3
233
29
28
15
26
1.96
33266--33516
68
3.8
65
78
8
210
23
29
17
29
1.97
34183--34243
30
2.0
30
83
0
77
31
22
8
37
1.84
36579--36643
32
2.0
32
96
0
121
44
3
16
35
1.64
36584--36632
16
3.1
16
75
19
57
42
4
16
36
1.67
37342--37467
40
3.2
40
88
5
177
23
21
27
26
1.99

Tables:   1

The End!