Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2444
Parameters: 2 7 7 80 10 50 1000
Length:  36846

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
641--782
49
2.7
52
77
12
157
26
30
18
24
1.98
3912--3988
40
1.9
40
97
0
145
40
22
19
18
1.92
12030--12179
75
2.0
75
92
2
248
14
26
24
34
1.94
17637--17715
37
2.1
37
88
4
115
25
30
18
25
1.98
17833--18243
47
8.6
47
91
4
651
29
30
8
32
1.87
17833--18243
145
2.9
141
91
4
651
29
30
8
32
1.87
17833--18243
192
2.1
192
95
0
741
29
30
8
32
1.87
22931--23029
23
4.3
23
92
3
155
30
25
21
23
1.99
23294--23334
20
2.0
20
85
0
55
17
31
4
46
1.69
31456--31502
20
2.3
20
81
0
58
29
34
12
23
1.92
35505--35556
24
2.2
24
96
0
95
23
26
23
26
2.00
35875--36000
41
3.1
41
91
1
209
29
18
17
34
1.94

Tables:   1

The End!